References
List of sources used to compile the database:
Other databases
- PubChem: pubchem.ncbi.nlm.nih.gov
- ChemSpider: www.chemspider.com
- T3DB: www.t3db.ca
- KNApSAcK: www.knapsackfamily.com
- Food and drug administration: precision.fda.gov
- Wikidata: www.wikidata.org
- Kyoto Encyclopedia of Genes and Genomes: www.kegg.jp
- European Bioinformatics Institute: www.ebi.ac.uk
- CompTox Chemicals Dashboard: comptox.epa.gov
- Comparative Toxicogenomics Database: www.ctdbase.com
- Developmental therapeutics program: dtp.cancer.gov
- Molecular recognition database, BindingDB: www.bindingdb.org
- Wikipedia: en.wikipedia.org
QSAR Web servers and software
-
VEGA.
Software link: www.vegahub.eu/about-vegahub/ -
VEGA-NRMEA.
Software link: www.vegahub.eu/portfolio-item/vega-nrmea/ -
vNN ADMET. Variable Nearest Neighbor.
Web server link: vnnadmet.bhsai.org/vnnadmet/login.xhtml -
ADMETSAR2.
Web server link: lmmd.ecust.edu.cn/admetsar2/ -
PKCSM.
Web server link: biosig.lab.uq.edu.au/pkcsm/prediction - ADMETlab 2.0. Web server link: admetmesh.scbdd.com/
- SwissADME. Web server link: www.swissadme.ch/
Bibliography
-
K.F Nielsen, J. Smedsgaard
Fungal metabolite screening: database of 474 mycotoxins and fungal metabolites for dereplication by standardised liquid chromatography–UV–mass spectrometry methodology.
J. Chromatogr. A. 2003.
doi.org/10.1016/S0021-9673(03)00490-4 -
M. Sulyok, D. Stadler, D. Steiner, R. Krska
Validation of an LC-MS/MS-based dilute-and-shoot approach for the quantification of > 500 mycotoxins and other secondary metabolites in food crops: challenges and solutions.
Anal. Bioanal. Chem. 2020;412:2607–2620
doi.org/10.1007/s00216-020-02489-9 -
D. Habauzit, P. Lemée, L.M. Botana, V. Fessard
Toxicity Predictions for Mycotoxins: A Combined In Silico Approach on Enniatin-Like Cluster.
Expo Health (2022)
doi.org/10.1007/s12403-022-00492-2 -
P. Lemée, V. Fessard, D. Habauzit
Prioritization of mycotoxins based on mutagenicity and carcinogenicity evaluation using combined in silico QSAR methods. Environment Pollution.
(2023) 323:121284
doi.org/10.1016/j.envpol.2023.121284
Algorithms
-
Smiles Drawer
Daniel Probst and Jean-Louis Reymond
SmilesDrawer: Parsing and Drawing SMILES-Encoded Molecular Structures Using Client-Side JavaScript.
J. Chem. Inf. Model. 2018;58:1–7
doi.org/10.1021/acs.jcim.7b00425 -
Maphilight
-
RWD Image Maps
Acknowledgements
We are grateful to Pierre Lemée and to Alkante for the Webserver development.